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The operations to create a new model and to perform FBA simulations using Model-seed and the local model-seed data are grouped in the menu Plugin Builder > MSeed > Operations > Model.

Build a model[edit]

To build a model from an annotation in the local model-seed go to the menu Plugin Builder > MSeed > Operations > Model > build. The user needs to select the annotation (from local model-seed) to be used in the model reconstruction process and the name for the new model. A new model will be added to the local model-seed with the defined name.

Model FBA[edit]

Quick how-to to perform Wild-type and Reaction KO simulations.

Return to the Model-seed How-to Index