Table format Reader

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The table format reader allows the user to load models in TSV and CSV file formats.
You can check for examples in CaseStudy.
It is necessary to give 2 files so the model can be built:

  • Reactions File
  • Metabolites File



TableFiles.png

Considering the multiple ways that this type of files can be specified, the reader's configuration panel gives the user the capability to configure the way OptFlux will read the table.
In this panel it possible to specify the column separators, the existance of headers in the files, and also the connection between each column and the metabolic information of the model.
This process must be made for both files (the different tabs of the configuration panel).

Tableconfig.png

Back to OptFlux Readers