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**[[OptFlux Readers]]
 
**[[OptFlux Readers]]
 
***[[SBML Reader]]
 
***[[SBML Reader]]
 +
***[[Flat Files Reader]]
 +
***[[Metatool]]
 
***[[OptFlux3:MR | OptFlux Repository]]
 
***[[OptFlux3:MR | OptFlux Repository]]
***[[Flat Files Reader]]
 
 
***[[Table format Reader]]
 
***[[Table format Reader]]
 
***[[Cell Designer Reader]]
 
***[[Cell Designer Reader]]
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== Optimization ==
 
== Optimization ==
*Evolutionary
+
*[[OptFlux3:Evolutionary | Evolutionary]]
 
*[[OptFlux3:OPK | Optknock]]
 
*[[OptFlux3:OPK | Optknock]]
  
 
== Help ==
 
== Help ==
 
*Repository Manager
 
*Repository Manager
 +
**[[KnownProblems:RepositoryManager | Known Problems]]
 
*Updates
 
*Updates
 +
*Preferences
 +
**[[Cplex Configuration:Preferences | Cplex Configuration]]
  
 
== Plugins ==
 
== Plugins ==
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*[[OptFlux3:MR  | Model Repository]]
 
*[[OptFlux3:MR  | Model Repository]]
 
*[[OptFlux3:SIM | Simulation]]
 
*[[OptFlux3:SIM | Simulation]]
*[[OptFlux3:OPT | Optimization]]
+
*[[OptFlux3:Evolutionary | Optimization]]
 
*[[OptFlux3:SMP | Simplification]]
 
*[[OptFlux3:SMP | Simplification]]
*[[OptFlux3:BC:balancechecker | Mass Balance Validator]]
+
*[[OptFlux3:BC:balancechecker:hgfhgf | Mass Balance Validator]]
 
*[[OptFlux3:OPK | OptKnock]]
 
*[[OptFlux3:OPK | OptKnock]]
*[[OptFlux3:CDG | CellDesigner]]
 
*[[OptFlux3:CYT | XGMML]]
 
 
*[[OptFlux3:TNA | Network Topology Analysis (TNA)]]
 
*[[OptFlux3:TNA | Network Topology Analysis (TNA)]]
 +
*[[OptFlux3:EFM | Elementary Flux Modes]]
 +
*[[OptFlux3:RT | Reg4OptFlux - Regulatory plugin]]
 +
*[[OptFlux3:METAVIZ | Metabolic Network Visualization Plugin]]
 +
*[[OptFlux3:MFA | Metabolic Flux Analysis]]
 +
*[[OptFlux3:COBRA | Cobra4OptFlux - Cobra plugin]]
 +
*[[OptFlux3:Serialization | Serialization plugin]]

Latest revision as of 10:16, 21 December 2016


Project And Model Handling[edit]

Model Handling[edit]

Simulation[edit]

Analysis[edit]

Optimization[edit]

Help[edit]

Plugins[edit]