From Optflux
Jump to: navigation, search
Line 1: Line 1:
 
{{DISPLAYTITLE:Model-seed plug-in for OptFlux 3}}
 
{{DISPLAYTITLE:Model-seed plug-in for OptFlux 3}}
  
== Model-seed plug-in operations ==
+
=== Model-seed plug-in operations ===
  
  
Login: operation to login in the local model-seed
+
*Login: operation to login in the local model-seed
 
* Logout: operation to logout
 
* Logout: operation to logout
 
* Pull:
 
* Pull:
Line 12: Line 12:
 
**Model: send a model from OptFlux to model-seed
 
**Model: send a model from OptFlux to model-seed
 
**Media: send a media from OptFlux to model-seed
 
**Media: send a media from OptFlux to model-seed
* Operations:
+
== Operations ==
 
*Merge Biochemistry: merge two biochemistries in local model-seed.
 
*Merge Biochemistry: merge two biochemistries in local model-seed.
 
*Import:
 
*Import:

Revision as of 14:01, 25 March 2013


Model-seed plug-in operations

  • Login: operation to login in the local model-seed
  • Logout: operation to logout
  • Pull:
    • Model: import a model from model-seed to OptFlux
    • Media: import a media from model-seed to OptFlux
  • Commit:
    • Model: send a model from OptFlux to model-seed
    • Media: send a media from OptFlux to model-seed

Operations

  • Merge Biochemistry: merge two biochemistries in local model-seed.
  • Import:
    • Biochemistry: import biochemistry to local model-seed
    • Mappings: import mappings to local model-seed
    • Genome: import annotation to local model-seed
  • Model:
    • Build: build a model in local model-seed
    • FBA
    • Wild Type:
      • Reaction KOs


Technical documentation for developers