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{{DISPLAYTITLE:Model-seed plug-in for OptFlux 3}}
 
{{DISPLAYTITLE:Model-seed plug-in for OptFlux 3}}
  
The Model-seed operations are located in the menu Plug-in Builder -> MSeed.
+
The Model-seed operations are located in the menu Plug-in Builder -> MSeed.<br />
 
If the MS plug-in is not yet loaded in OptFlux, just go to to Plug-in Builder -> Create... and select the MS XML file, OptFlux will then automatically build the new plug-in.
 
If the MS plug-in is not yet loaded in OptFlux, just go to to Plug-in Builder -> Create... and select the MS XML file, OptFlux will then automatically build the new plug-in.
  

Revision as of 15:37, 25 March 2013


The Model-seed operations are located in the menu Plug-in Builder -> MSeed.
If the MS plug-in is not yet loaded in OptFlux, just go to to Plug-in Builder -> Create... and select the MS XML file, OptFlux will then automatically build the new plug-in.

Model-seed plug-in operations

Menu-ms.png

  • Login: operation to login in the local model-seed
  • Logout: operation to logout
  • Pull:
    • Model: import a model from model-seed to OptFlux
    • Media: import a media from model-seed to OptFlux
  • Commit:
    • Model: send a model from OptFlux to model-seed
    • Media: send a media from OptFlux to model-seed
  • Merge Biochemistry: merge two biochemistries in local model-seed.
  • Import from server to local model-seed:
    • Biochemistry: import biochemistry
    • Mappings: import mappings
    • Genome: import annotation
  • Model
    • Build: build a model in local model-seed
    • FBA
      • Wild Type
      • Reaction KO
      • Gene KO


Technical documentation for developers