Difference between revisions of "Ms-import"

Revision as of 16:31, 25 March 2013

The Model-seed works in two levels, a local server and The seed server, it is possible to import to the local model-seed:

• biochemistry data
• genome annotations
• mappings

And use these data elements in local operations.

Import biochemistry

To import a biochemistry select the option MSeed -> Import -> Biochemistry and choose a name for the local data element. OptFlux will then ask Model-seed to retrieve the latest biochemistry version from The Seed and to create local of version with the selected name.

Import mappings

To import a mapping select the option MSeed -> Import -> Mappings and choose a name for the local data element and the local biochemistry to be associated to the new mapping. OptFlux will then ask Model-seed to retrieve the mapping from The Seed and to create a local of version with the inserted name and connected to the selected local biochemistry.

Import genome

To import a genome select the option MSeed -> Import -> Mappings:

• choose one of the available genomes in The Seed
• a name for the local element
• the mapping to be used.