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| − | + | '''HowTos Page''' | |
| − | + | [[How to create a new model/project from SBML]] | |
| − | + | [[How to create a new model/project from text files]] | |
| − | + | 3 - How to save and load projects | |
| − | + | 4 - How to export models to SBML | |
| − | + | 5 - Interaction with Cell Designer | |
| − | + | a - How to load a CD for visualization | |
| − | + | b - How to export a model to CD SBML (with results) | |
| − | + | 6 - How to do a wild type simulation | |
| − | + | 7 - How to do a mutant simulation | |
| − | + | a - Reaction delection | |
| − | + | b - Gene knockout | |
| − | + | 8 - Environmental conditions | |
| − | + | 9 - Flux Variability Analysis | |
| − | + | a - How to Calculate Flux Limits | |
| − | + | b - How to generate a Flux Variability Graph | |
| − | + | 10 - Essential genes/reactions | |
| − | + | a - Determining essential genes/reactions | |
| − | + | b - Loading from file | |
| − | + | 11 - Model Simplification | |
| − | + | a - How to calculate a Simplified Model | |
| − | + | b - How to calculate critical genes/reactions | |
| − | + | 12 - How to optimize the knockout set | |
| − | + | a. Reaction deletions | |
| − | + | b. Gene knockouts | |
| − | + | 13 - How to use Multiobjective strain optimization | |
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