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| − | + | '''HowTos Page''' | |
| + | [[How to create a new model/project from SBML]] | ||
| − | + | [[How to create a new model/project from text files]] | |
| − | + | [[How to save and load projects]] | |
| − | + | [[How to export models to SBML]] | |
| − | + | [[Interaction with Cell Designer]] | |
| − | + | [[How to load a CD for visualization]] | |
| + | [[How to export a model to CD SBML (with results)]] | ||
| − | + | [[How to do a wild type simulation]] | |
| − | + | [[How to do a mutant simulation]] | |
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| + | [[Reaction delection]] | ||
| + | [[Gene knockout]] | ||
| − | + | [[Environmental conditions]] | |
| − | + | Flux Variability Analysis | |
| − | + | [[How to Calculate Flux Limits]] | |
| − | + | [[How to generate a Flux Variability Graph]] | |
| − | + | Essential genes/reactions | |
| − | + | [[Determining essential genes/reactions]] | |
| + | [[Loading from file]] | ||
| − | + | 11 - Model Simplification | |
| − | + | a - How to calculate a Simplified Model | |
| − | + | b - How to calculate critical genes/reactions | |
| − | + | 12 - How to optimize the knockout set | |
| − | + | a. Reaction deletions | |
| − | + | b. Gene knockouts | |
| − | + | 13 - How to use Multiobjective strain optimization | |
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