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[[How to create a new model/project from SBML]] | [[How to create a new model/project from SBML]] | ||
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[[How to create a new model/project from text files]] | [[How to create a new model/project from text files]] | ||
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[[How to save and load projects]] | [[How to save and load projects]] | ||
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[[How to export models to SBML]] | [[How to export models to SBML]] | ||
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[[Interaction with Cell Designer]] | [[Interaction with Cell Designer]] | ||
[[How to load a CD for visualization]] | [[How to load a CD for visualization]] |
Revision as of 19:14, 16 November 2009
HowTos Page
How to create a new model/project from SBML How to create a new model/project from text files How to save and load projects How to export models to SBML Interaction with Cell Designer
How to load a CD for visualization How to export a model to CD SBML (with results) 6 - How to do a wild type simulation 7 - How to do a mutant simulation a - Reaction delection b - Gene knockout 8 - Environmental conditions 9 - Flux Variability Analysis a - How to Calculate Flux Limits b - How to generate a Flux Variability Graph 10 - Essential genes/reactions a - Determining essential genes/reactions b - Loading from file 11 - Model Simplification a - How to calculate a Simplified Model b - How to calculate critical genes/reactions 12 - How to optimize the knockout set a. Reaction deletions b. Gene knockouts 13 - How to use Multiobjective strain optimization