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You can access
 
You can access
 
the "Environmental Conditions" option under the "Simulation" menu.<br>
 
the "Environmental Conditions" option under the "Simulation" menu.<br>
<div style="display: block; text-align: left;">http://sites.google.com/site/optfluxhowtos/howtos/environmental-conditions/EnvironmentalConditionsMenu.png</div>
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[[Image:Simulation menu.png]]
 
<br>
 
<br>
 
In the Environmental Conditions you can select the model/project to work, and set up your conditions.<br>
 
In the Environmental Conditions you can select the model/project to work, and set up your conditions.<br>

Revision as of 19:37, 17 November 2009

How to create Environmental Conditions

You can access the "Environmental Conditions" option under the "Simulation" menu.
Simulation menu.png
In the Environmental Conditions you can select the model/project to work, and set up your conditions.


In the reactions list you can search the reactions present in the model, select and change their limits (lower bound / upper bound) and add the new constraints to the reaction constraints list. The reactions in this list are typically extra-cellular/ drain fluxes, i.e. they can be used to define the way external metabolites are consumed or produced.

After you finish you will find a new icon representing the Environmental Conditions in the clipboard.

http://sites.google.com/site/optfluxhowtos/howtos/environmental-conditions/EnvironmentalConditionsSolution.png