From Optflux
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[[How to create a new model/project from text files]] | [[How to create a new model/project from text files]] | ||
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| + | [[How to save and load projects]] | ||
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4 - How to export models to SBML | 4 - How to export models to SBML | ||
5 - Interaction with Cell Designer | 5 - Interaction with Cell Designer | ||
Revision as of 18:58, 16 November 2009
HowTos Page
How to create a new model/project from SBML
How to create a new model/project from text files
4 - How to export models to SBML
5 - Interaction with Cell Designer
a - How to load a CD for visualization
b - How to export a model to CD SBML (with results)
6 - How to do a wild type simulation
7 - How to do a mutant simulation
a - Reaction delection
b - Gene knockout
8 - Environmental conditions
9 - Flux Variability Analysis
a - How to Calculate Flux Limits
b - How to generate a Flux Variability Graph
10 - Essential genes/reactions
a - Determining essential genes/reactions
b - Loading from file
11 - Model Simplification
a - How to calculate a Simplified Model
b - How to calculate critical genes/reactions
12 - How to optimize the knockout set
a. Reaction deletions
b. Gene knockouts
13 - How to use Multiobjective strain optimization