From Optflux
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[[How to export models to SBML]] | [[How to export models to SBML]] | ||
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| + | [[Interaction with Cell Designer]] | ||
a - How to load a CD for visualization | a - How to load a CD for visualization | ||
b - How to export a model to CD SBML (with results) | b - How to export a model to CD SBML (with results) | ||
Revision as of 19:12, 16 November 2009
HowTos Page
How to create a new model/project from SBML
How to create a new model/project from text files
Interaction with Cell Designer
a - How to load a CD for visualization
b - How to export a model to CD SBML (with results)
6 - How to do a wild type simulation
7 - How to do a mutant simulation
a - Reaction delection
b - Gene knockout
8 - Environmental conditions
9 - Flux Variability Analysis
a - How to Calculate Flux Limits
b - How to generate a Flux Variability Graph
10 - Essential genes/reactions
a - Determining essential genes/reactions
b - Loading from file
11 - Model Simplification
a - How to calculate a Simplified Model
b - How to calculate critical genes/reactions
12 - How to optimize the knockout set
a. Reaction deletions
b. Gene knockouts
13 - How to use Multiobjective strain optimization