Difference between revisions of "MS-howto"

Revision as of 14:28, 25 March 2013

The Model-seed operations are located

to load the Model-seed plug-in

Model-seed plug-in operations

• Login: operation to login in the local model-seed
• Logout: operation to logout
• Pull:
  • Model: import a model from model-seed to OptFlux
  • Media: import a media from model-seed to OptFlux
• Commit:
  • Model: send a model from OptFlux to model-seed
  • Media: send a media from OptFlux to model-seed

• Merge Biochemistry: merge two biochemistries in local model-seed.
• Import from server to local model-seed
  • Biochemistry: import biochemistry
  • Mappings: import mappings
  • Genome: import annotation
• Model
  • Build: build a model in local model-seed
  • FBA
    • Wild Type
    • Reaction KOs

Technical documentation for developers

• Create a new plugin using the plugin builder (pdf)