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**Model: send a model from OptFlux to model-seed
 
**Model: send a model from OptFlux to model-seed
 
**Media: send a media from OptFlux to model-seed
 
**Media: send a media from OptFlux to model-seed
 
 
*Merge Biochemistry: merge two biochemistries in local model-seed.
 
*Merge Biochemistry: merge two biochemistries in local model-seed.
*Import from server to local model-seed
+
*Import from server to local model-seed:
 
**Biochemistry: import biochemistry  
 
**Biochemistry: import biochemistry  
 
**Mappings: import mappings  
 
**Mappings: import mappings  
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**FBA
 
**FBA
 
***Wild Type
 
***Wild Type
***Reaction KOs
+
***Reaction KO
 +
***Gene KO
  
  
 
== Technical documentation for developers  ==
 
== Technical documentation for developers  ==
 
*[[Create a new plugin using the plugin builder (pdf)]]
 
*[[Create a new plugin using the plugin builder (pdf)]]

Revision as of 14:29, 25 March 2013


The Model-seed operations are located in the menu: bla bla bla.

to load the Model-seed plug-in

Model-seed plug-in operations

  • Login: operation to login in the local model-seed
  • Logout: operation to logout
  • Pull:
    • Model: import a model from model-seed to OptFlux
    • Media: import a media from model-seed to OptFlux
  • Commit:
    • Model: send a model from OptFlux to model-seed
    • Media: send a media from OptFlux to model-seed
  • Merge Biochemistry: merge two biochemistries in local model-seed.
  • Import from server to local model-seed:
    • Biochemistry: import biochemistry
    • Mappings: import mappings
    • Genome: import annotation
  • Model
    • Build: build a model in local model-seed
    • FBA
      • Wild Type
      • Reaction KO
      • Gene KO


Technical documentation for developers