From Optflux
Simao.soares (talk | contribs) |
Simao.soares (talk | contribs) |
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**Media: send a media from OptFlux to model-seed | **Media: send a media from OptFlux to model-seed | ||
*Merge Biochemistry: merge two biochemistries in local model-seed. | *Merge Biochemistry: merge two biochemistries in local model-seed. | ||
− | *Import from server to local model-seed: | + | *[[ms-import |Import from server to local model-seed:] |
− | **Biochemistry: import biochemistry | + | **[[ms-import Biochemistry: import biochemistry] |
− | **Mappings: import mappings | + | **[[ms-import Mappings: import mappings ] |
− | **Genome: import annotation | + | **[[ms-import Genome: import annotation] |
*Model | *Model | ||
**Build: build a model in local model-seed | **Build: build a model in local model-seed |
Revision as of 15:53, 25 March 2013
The Model-seed operations are located in the menu Plug-in Builder -> MSeed.
If the MS plug-in is not yet loaded in OptFlux, just go to to Plug-in Builder -> Create... and select the MS XML file, OptFlux will then automatically build the new plug-in.
Model-seed plug-in operations
- Login: operation to login in the local model-seed
- Logout: operation to logout
- Pull:
- Model: import a model from model-seed to OptFlux
- Media: import a media from model-seed to OptFlux
- Commit:
- Model: send a model from OptFlux to model-seed
- Media: send a media from OptFlux to model-seed
- Merge Biochemistry: merge two biochemistries in local model-seed.
- [[ms-import |Import from server to local model-seed:]
- [[ms-import Biochemistry: import biochemistry]
- [[ms-import Mappings: import mappings ]
- [[ms-import Genome: import annotation]
- Model
- Build: build a model in local model-seed
- FBA
- Wild Type
- Reaction KO
- Gene KO